Nicotiana tabacumAssembly Name:Ntab-TN90
Gene File:GCF_000715135.1_Ntab-TN90_protein.faa.gz
| Position on the Genome | Gene Name | CDS | lcl|NW_015826295.1_cds_XP_016502618.1_16239 |
| PEP | XP_016502618.1 |
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| Position on the Genome | Chromosome | NW_015826295.1 | |
| Start Position | 59844 | ||
| End Position | 67791 | ||
| Strand | + | ||
| Annotation (Hayai Annotation ZEN) |
KusakiDB | KusakiDB Accession | KPRO00887996 |
|---|---|---|---|
| KusakiDB version | 2.0 | ||
| Evidence is present | Yes | ||
| Databases intersection (the sequence exists in multiple databases) | orthodb-refseq-uniprot |
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| OrthoDB | Database version | 10.1 | |
| Description | RING-type E3 ubiquitin transferase |
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| Gene ID | |||
| Ortholog group unique ID | |||
| Functional annotation | Source DB | refseq |
|
| Protein name | putative E3 ubiquitin-protein ligase LIN-1 isoform X2 |
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| Accession | |||
| CrossRef Refseq from UniProt | NA |
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| EC | NA |
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| KEGG entry | NA |
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| KO ID | NA |
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| Pfam ID | PF00400,PF04564 |
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| Pfam Description | Details | ||
| InterPro ID | IPR003613,IPR001680 |
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| InterPro Description | Details | ||
| GO ID | GO:0016567,GO:0005515,GO:0004842 |
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| GO Description | Details | ||
| GOslim ID | GO:0019787,GO:0005515,GO:0006464 |
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| GO slim Description | Details | ||
| Transcription Factor (TF) family | NA |
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| TF family Description | NA |
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| Best hit taxonomy | Species | Nicotiana tomentosiformis | |
| Family | Solanaceae | ||
| Phylum | Streptophyta | ||
| Superkingdom | Eukaryota | ||
| Comments | |||
